yasaichi

"""
以下の論文で提案された改良x-means法の実装

クラスター数を自動決定するk-meansアルゴリズムの拡張について
http://www.rd.dnc.ac.jp/~tunenori/doc/xmeans_euc.pdf
"""

import numpy as np
from scipy import stats
from sklearn.cluster import KMeans

mabdrabo

import pyaudio
import wave
 
FORMAT = pyaudio.paInt16
CHANNELS = 2
RATE = 44100
CHUNK = 1024
RECORD_SECONDS = 5
WAVE_OUTPUT_FILENAME = "file.wav"
 

dmachi

from starcluster.clustersetup import ClusterSetup
from starcluster.logger import log

class addRepository(ClusterSetup):
     def __init__(self, repositories=None):
          self.repositories=repositories
          if self.repositories:
              self.repositories= [repo.strip() for repo in repositories.split(',')]

chapmanb

from Bio import Entrez

def fetch_gene_coordinates(search_term):
    handle = Entrez.esearch(db="gene", term=search_term)
    rec = Entrez.read(handle)
    gene_id = rec["IdList"][0] # assuming best match works
    
    handle = Entrez.efetch(db="gene", id=gene_id, retmode="xml")
    rec = Entrez.read(handle)[0]
    gene_locus = rec["Entrezgene_locus"][0]