Anders Riutta ariutta

We want to run the equivalent of the following, getting name, age and friends' name(s):

GET https://example.org/users/1

With GraphQL, we can use user.graphql to get the following:

      { 
        id: 'https://example.org/users/1',

	# ndexr relies on httr but doesn't handle importing it
	library(httr)
	library(ndexr)

	NDEX_USER <- Sys.getenv("NDEX_USER")
	NDEX_PWD <- Sys.getenv("NDEX_PWD")

	NETWORK_ID <- '37800bb2-5bb4-11e9-831d-0660b7976219'

	ndexcon <- NA

	<!DOCTYPE html>
	<meta charset="utf-8">
	<link rel="stylesheet" href="https://maxcdn.bootstrapcdn.com/bootstrap/4.0.0-beta/css/bootstrap.min.css" integrity="sha384-/Y6pD6FV/Vv2HJnA6t+vslU6fwYXjCFtcEpHbNJ0lyAFsXTsjBbfaDjzALeQsN6M" crossorigin="anonymous">

	<h1>Pretty TSV Viewer</h1>

	<br>

	<div id="alert-cannot-update-query-param" class="row">
	<div class="alert alert-warning" role="alert">

	{
	"Name": "ACE Inhibitor Pathway",
	"Organism": "Homo sapiens",
	"License": "CC BY 2.0",
	"Comment": [
	{
	"Source": "WikiPathways-category",
	"content": "Physiological Process"
	},
	{

	var parse = require('s-expression');
	var showdown = require('showdown');

	function zoomOn(nodes) {
	console.log('zoomOn');
	console.log(`nodes: ${nodes}`);
	}

	function toggleHighlight(node, color) {
	console.log('toggleHighlight');

	var parse = require('s-expression');
	var showdown = require('showdown');

	function zoomOn(nodes) {
	console.log('zoomOn');
	console.log(`nodes: ${nodes}`);
	}

	function toggleHighlight(node, color) {
	console.log('toggleHighlight');

	<?xml version="1.0" encoding="UTF-8"?>
	<Pathway xmlns="http://pathvisio.org/GPML/2013a" Name="Sandbox Pathway" Last-Modified="2/20/2013" Organism="Homo sapiens" License="CC BY 2.0">
	<Comment Source="WikiPathways-description">This is just one test pathway with a variety of object types including datanodes which can be connected to database entries (double-click on them when in edit mode). Feel free to edit anything on this page. </Comment>
	<Comment Source="BotTest">20160101000001</Comment>
	<BiopaxRef>bf7</BiopaxRef>
	<Graphics BoardWidth="768.6990077177508" BoardHeight="540.0" />
	<Shape GraphId="cd07f">
	<Comment>DQo8P3htbCB2ZXJzaW9uPSIxLjAiIGVuY29kaW5nPSJVVEYtOCIgc3RhbmRhbG9uZT0ibm8iPz4NCjwhLS0gQ3JlYXRlZCB3aXRoIElua3NjYXBlIChodHRwOi8vd3d3Lmlua3NjYXBlLm9yZy8pIC0tPg0KPHN2Zw0KICAgeG1sbnM6ZGM9Imh0dHA6Ly9wdXJsLm9yZy9kYy9lbGVtZW50cy8xLjEvIg0KICAgeG1sbnM6Y2M9Imh0dHA6Ly93ZWIucmVzb3VyY2Uub3JnL2NjLyINCiAgIHhtbG5zOnJkZj0iaHR0cDovL3d3dy53My5vcmcvMTk5OS8wMi8yMi1yZGYtc3ludGF4LW5zIyINCiAgIHhtbG5zOnN2Zz0iaHR0cDov

	var Promise = require('es6-promise').Promise;
	var superagent = require('superagent');
	var prune = function(res) {
	return {
	body: res.body,
	text: res.text,
	headers: res.headers,
	statusCode: res.statusCode,
	status: res.status,
	ok: res.ok,

	var input = [1, 1, 1, 2, 2, 2, 3, 3];
	var outputExpected = [[1, 1, 1], [2, 2, 2], [3, 3]];

	var outputActual = input.reduce(function(acc, currentItem) {
	var accLength = acc.length;
	var currentGroup = acc[accLength - 1];
	var currentGroupLength = currentGroup.length;
	if (currentGroupLength > 0) {
	var previousItem = currentGroup[currentGroupLength - 1];
	if (previousItem === currentItem) {

	var strict = true;
	var saxStream = sax.createStream(strict, {xmlns: true, encoding: 'utf8'})

	function createSaxStreamEventObservable(eventName) {
	return Rx.Observable.fromEventPattern(
	function addHandler (h) {
	saxStream.on(eventName, h);
	},
	function delHandler () {}
	);