Fawaz Dabbaghie fawaz-dabbaghieh
fawaz-dabbaghieh
/ extracting_metadata.R
Created
November 17, 2016 13:01
Simple function for extracting metadata from he DeepBlue server in R
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| deepblue_extract_metadata <- function(epi_mark,epi_project, auth_key) { | |
| #get sample ids | |
| experiments_ids <- deepblue_list_experiments(epigenetic_mark = epi_mark, | |
| project = epi_project, | |
| user_key = auth_key) | |
| #extracting all information | |
| metadata <- deepblue_info(deepblue_extract_ids(experiments_ids), user_key = auth_key) | |