-
-
Save fccoelho/301518 to your computer and use it in GitHub Desktop.
simple peak detection code
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
import sys | |
from numpy import NaN, Inf, arange, isscalar, array | |
def peakdet(v, delta, x = None): | |
""" | |
Converted from MATLAB script at http://billauer.co.il/peakdet.html | |
Returns two arrays | |
function [maxtab, mintab]=peakdet(v, delta, x) | |
%PEAKDET Detect peaks in a vector | |
% [MAXTAB, MINTAB] = PEAKDET(V, DELTA) finds the local | |
% maxima and minima ("peaks") in the vector V. | |
% MAXTAB and MINTAB consists of two columns. Column 1 | |
% contains indices in V, and column 2 the found values. | |
% | |
% With [MAXTAB, MINTAB] = PEAKDET(V, DELTA, X) the indices | |
% in MAXTAB and MINTAB are replaced with the corresponding | |
% X-values. | |
% | |
% A point is considered a maximum peak if it has the maximal | |
% value, and was preceded (to the left) by a value lower by | |
% DELTA. | |
% Eli Billauer, 3.4.05 (Explicitly not copyrighted). | |
% This function is released to the public domain; Any use is allowed. | |
""" | |
maxtab = [] | |
mintab = [] | |
if x is None: | |
x = arange(len(v)) | |
v = asarray(v) | |
if len(v) != len(x): | |
sys.exit('Input vectors v and x must have same length') | |
if not isscalar(delta): | |
sys.exit('Input argument delta must be a scalar') | |
if delta <= 0: | |
sys.exit('Input argument delta must be positive') | |
mn, mx = Inf, -Inf | |
mnpos, mxpos = NaN, NaN | |
lookformax = True | |
for i in arange(len(v)): | |
this = v[i] | |
if this > mx: | |
mx = this | |
mxpos = x[i] | |
if this < mn: | |
mn = this | |
mnpos = x[i] | |
if lookformax: | |
if this < mx-delta: | |
maxtab.append((mxpos, mx)) | |
mn = this | |
mnpos = x[i] | |
lookformax = False | |
else: | |
if this > mn+delta: | |
mintab.append((mnpos, mn)) | |
mx = this | |
mxpos = x[i] | |
lookformax = True | |
return array(maxtab), array(mintab) | |
if __name__=="__main__": | |
series = [0,0,0,2,0,0,0,-2,0,0,0,2,0,0,0,-2,0] | |
print peakdet(series,1) |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment