- The Practice of programming - Brian W. Kernighan
- The Unix Programming Environment - Brian W. Kernighan and Rob Pike
- Numerical Recipes in C: The Art of Scientific Computing
- Structure and Interpretation of Computer Programs.
- Higher-Order Perl: Transforming Programs with Programs - Mark Jason Dominus
- Reverse Engineering for Beginners - Dennis Yurichev
- The Pragmatic Programmer: From Journeyman to Master
- The Mythical Man-Month
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Cancer_type | Lifetime_cancer_incidence | Total_cells_tissue | Total_Stem_Cells | Stem_cell_divisions_per_year | Stem_cell_divisions_per_lifetime | LSCD | |
---|---|---|---|---|---|---|---|
ALL | 0.0041 | 3000000000000 | 135000000 | 12 | 960 | 129900000000 | |
BCC | 0.3 | 180000000000 | 5820000000 | 7.6 | 608 | 3550000000000 | |
CLL | 0.0052 | 3000000000000 | 135000000 | 12 | 960 | 129900000000 | |
Colorectal | 0.048 | 30000000000 | 200000000 | 73 | 5840 | 1168000000000 | |
Colorectal_FAP | 1 | 30000000000 | 200000000 | 73 | 5840 | 1168000000000 | |
Colorectal_Lynch | 0.5 | 30000000000 | 200000000 | 73 | 5840 | 1168000000000 | |
Duodenum_adenocarcinoma | 0.0003 | 680000000 | 4000000 | 24 | 1947 | 7796000000 | |
Duodenum_adenocarcinoma_with_FAP | 0.035 | 680000000 | 4000000 | 24 | 1947 | 7796000000 | |
Esophageal_squamous_cell_carcinoma | 0.001938 | 3240000000 | 846000 | 17.4 | 1390 | 1203000000 |
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#include <stdint.h> | |
#include <cstdlib> | |
#include <iostream> | |
#include <fstream> | |
#include <sstream> | |
using namespace std; | |
void usage() { | |
cerr << "Usage: ./get_count_with_sufficient_coverage samtools_depth_file cutoff[INT]"; | |
cerr << "Assumes 2 samples."; |
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# Compiled source # | |
################### | |
*.com | |
*.class | |
*.dll | |
*.exe | |
*.o | |
*.so | |
# Packages # |
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# load up area shape file: | |
library(maptools) | |
area <- readShapePoly("ne_10m_parks_and_protected_lands_area.shp") | |
# # or file.choose: | |
# area <- readShapePoly(file.choose()) | |
library(RColorBrewer) | |
colors <- brewer.pal(9, "BuGn") |