Last active
March 16, 2023 21:51
-
-
Save hrbrmstr/17bc21af55392f23f012f57bb2fda51c to your computer and use it in GitHub Desktop.
parallel, parameterized knitr reports
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
library(doParallel) | |
rpts <- list(list(out="one.html", params=list(some_var="One")), | |
list(out="two.html", params=list(some_var="Two")), | |
list(out="three.html", params=list(some_var="Three")), | |
list(out="four.html", params=list(some_var="Four"))) | |
do_rpt <- function(r) { | |
require(rmarkdown) | |
tf <- tempfile() | |
dir.create(tf) | |
rmarkdown::render(input="tstrpt.Rmd", | |
output_file=r$out, | |
intermediates_dir=tf, | |
params=r$params, | |
quiet=TRUE) | |
unlink(tf) | |
} | |
registerDoParallel(cores=3) | |
foreach(r=rpts, .combine=c) %dopar% do_rpt(r) | |
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
--- | |
title: Test Report | |
output: html_document | |
params: | |
some_var: "default" | |
some_date: !r as.Date("2015-01-01") | |
--- | |
Report for `r params$some_var` run on `r params$some_date` |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
You save my life.