Ian Czekala iancze

Lecturer; University of St. Andrews, UK; School of Physics and Astronomy

100 followers · 111 following

University of St. Andrews
St. Andrews, UK
https://iancze.github.io
https://orcid.org/0000-0002-1483-8811

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raeidsaqur / jupyter.slurm

Last active March 4, 2025 20:32

SLURM script for opening a Jupyter Notebook tunnel

	#!/bin/bash
	#SBATCH -p p100
	#SBATCH --gres=gpu:1
	#SBATCH -c 4
	#SBATCH --mem=16G
	#SBATCH --nodes=1
	#SBATCH --ntasks=1
	##SBATCH --ntasks-per-node=1
	#SBATCH --time=04:00:00
	#SBATCH --job-name=jupyter-notebook

gully / zenodo_upload.py

Created April 5, 2018 20:54

A function to use the Zenodo API to automatically upload your large, raw, emcee MCMC chain .npy files for reproducibility of posteriors. Requires a Zenodo API token.

	#!/usr/bin/env python
	import os
	import requests

	#See http://developers.zenodo.org/ to get a token

	# You may want to change your token path
	## Also, do not share your token, it is like a password!
	token_file = "../token.txt"
	token_fn = os.path.expandvars(token_file)

astrofrog / async_plotting.py

Created December 10, 2011 00:11

Asynchronous Plotting in Matplotlib: rather than call savefig directly, add plots to an asynchronous queue to avoid holding up the main program. Makes use of multiple processes to speed up the writing out. Suggestions welcome!

	import time
	import multiprocessing as mp

	import numpy as np

	import matplotlib
	matplotlib.use('Agg')
	import matplotlib.pyplot as plt