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April 22, 2019 19:24
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Installation code for rnaseqTools
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| downloadNotInstalled<-function(x){ | |
| for(i in x){ | |
| if(!require(i,character.only=TRUE)){ | |
| if (!requireNamespace("BiocManager")){install.packages("BiocManager")} | |
| BiocManager::install(i) | |
| } | |
| } | |
| } | |
| requiredPackages = c("Biobase", "S4Vectors","SummarizedExperiment","devtools","edgeR") | |
| downloadNotInstalled(requiredPackages) | |
| devtools::install_github(repo = "paulsoj1/rnaseqTools", | |
| host = "https://github.roche.com/api/v3", | |
| upgrade_dependencies = FALSE) |
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