nickdos

<!DOCTYPE html>
<html lang="en">
<head>
  <meta charset="UTF-8">
  <title>ALA Static Species Map Generator</title>
  <style>
    body { font-family: sans-serif; padding: 20px; background-color: #f4f4f9; }
    #map-container { margin-top: 15px; }
    img { border: 1px solid #ccc; border-radius: 8px; box-shadow: 0 4px 6px rgba(0,0,0,0.1); }
    #status { font-weight: bold; color: #555; }

nickdos

async function generateStaticMapImage(speciesName) {
  const width = 800;
  const height = 700;
  const bbox = "112,-44,154,-9"; // Australia bounding box

  const canvas = document.createElement('canvas');
  canvas.width = width;
  canvas.height = height;
  const ctx = canvas.getContext('2d');

nickdos

{
  "id": "transportation",
  "type": "line",
  "source": "openmaptiles",
  "source-layer": "transportation",
  "filter": [
    "!in",
    "class",
    "path",
    "footway",

nickdos

import urllib.request
import json
import csv

# pull out names, imageID, image URL, etc., from ALA occurrences API
url = "https://biocache-ws.ala.org.au/ws/occurrences/search?q=data_resource_uid:dr660&pageSize=5000"
req = urllib.request.Request(url)
r = urllib.request.urlopen(req).read()
content = json.loads(r.decode('utf-8'))
counter = 0

nickdos

# find all DwC terms in index/fields
curl -s https://biocache-ws.ala.org.au/ws/index/fields | jq -r '.[] | select(.dwcTerm != null) | .dwcTerm ' 

curl -s "https://biocache-ws.ala.org.au/ws/index/fields" | jq -r '.[] | select(.dwcTerm != null) | "\(.name)|\(.dwcTerm)" '

nickdos

#!/usr/local/bin/bash
#
# Script to generate distinct values and counts for DwC fields in the ALA (CSV output)
# Requires the jq tool to be installed - see https://stedolan.github.io/jq/
# Requires BASH v.4+
#
# Author: Nick dos Remedios <nick.dosremedios@csiro.au> 2018-07-04
#
# requested fields:
#

nickdos

#!/usr/local/bin/bash
# 
# Iterate over list of GBIF DOI keys from data_resource table and get a count of the
# distinct publication citations via GBIF API by storing each citation DOI (ID) in an
# associative array and then reading the length of the this array.
# 
# Requires BASH version > 4 and JQ command line tool (https://github.com/stedolan/jq)
#
# SQL: select gbif_registry_key from data_resource where gbif_registry_key <> '';
#

nickdos

#!/bin/bash

# https://unix.stackexchange.com/a/295528
# get list of fields: 
# mysql -u root -ppassword -D collectory -s -e "describe data_resource;" (paste into Excel and copy first column)
#
# run as ./collectory-sql-script-1.sh data_resource_fields.txt > data_resource_fields.csv

TABLE="data_hub"
USER="root"          # change to your DB user

nickdos

<!DOCTYPE html>
<html>
<head>
<meta name="viewport" content="initial-scale=1.0, user-scalable=no" />
<meta name="apple-mobile-web-app-capable" content="yes" />
<style type="text/css">
  html { height: 100% }
  body { height: 100%; margin: 0px; padding: 0px }
  #map_canvas { height: 100% }
</style>

nickdos

license: apache-2.0
height: 800