nikaspran

JS Quick Tips

This is a collection of quick and helpful JS tips or code snippets that might be useful in various circumstances.

nikaspran

Keybase proof

I hereby claim:

• I am nikaspran on github.
• I am nikaspran (https://keybase.io/nikaspran) on keybase.
• I have a public key whose fingerprint is D50C CC9B 729B B563 1FBB EC86 6112 C64F D377 F37D

To claim this, I am signing this object:

nikaspran

initDb
  .then(function () {
    return project.save();
  })
  .then(function () {
    return Environment.destroy();
  })
  .then(function () {
    done();
  });

nikaspran

'use strict';
function bootstrap(element, modules) {
  element = $(element);

  modules = modules || [];
//  modules.unshift(['$provide', function ($provide) {
//    $provide.value('$rootElement', element);
//  }]);
  modules.unshift('ng');
  var injector = element.injector();

nikaspran

 server.get('/api/entities', function (req, res, next) {
    var criteria = new Predicates.Criteria(server.db);
    criteria.select('Entity').from('Entity');

    if (req.query.type) {
      criteria.add(Predicates.eq('Entity.type', req.query.type));
    }

    if (req.query.name) { //TODO: escape regex
      criteria.add(Predicates.match('Entity.name', '^' + req.query.name));

nikaspran

server.get('/api/relations', function (req, res, next) {
    var predicates = [];

    if (req.query.type) {
      predicates.push(Predicates.eq('type', req.query.type));
    }

    if (req.query.sourceId) {
      predicates.push(Predicates.eq('sourceId', req.query.sourceId));
    }

nikaspran

/*jshint expr:true */
'use strict';
var Entity = require('./../model/Entity')(schema);

require('./EntityController')(server, schema);

describe('EntityController', function () {
  it('should GET single', function (done) {
    var entity = new Entity();
    entity.name = 'Test';

nikaspran

import Bio.Blast.NCBIWWW
import Bio.Blast.NCBIXML
import Bio.Blast.Record
import Bio.Align.Applications
import Bio.SeqIO
from StringIO import StringIO
from Bio.SeqRecord import SeqRecord
from Bio.Seq import Seq
from Bio.Alphabet import generic_protein
from Bio.Align.Applications import MafftCommandline

nikaspran

def filter_by_min_positives(blast_results, minPositivesPercent):
    correct_indices = []
    for index, sequence in enumerate(blast_results.alignments):
        if sequence.hsps[0].positives * 100.0 / sequence.length >= minPositivesPercent:
            correct_indices.append(index)

    filtered_results = Bio.Blast.Record.Blast()
    filtered_results.multiple_alignment = blast_results.multiple_alignment

    for index in correct_indices:

nikaspran

-- ecris schema queue @ CRDB

CREATE USER ecris IDENTIFIED BY ecris
     DEFAULT TABLESPACE tab
     TEMPORARY TABLESPACE temp;
     
GRANT CONNECT, RESOURCE, aq_administrator_role TO ecris;

begin