Put this alongside your .uproject, and change UATpath accordingly to where your engine is installed. This bat deletes all binaries and intermediate folders from the project and plugins, and regenerate project files (if your project is a c++ project).

UpdateProjectFiles.bat

@echo off
set UATpath="C:\EpicGames\UE_4.24\Engine\Binaries\DotNET\UnrealBuildTool.exe"

if exist Intermediate (
	echo Intermediate
	rmdir Intermediate /s /q
)
if exist intermediate (
	echo intermediate
	rmdir intermediate /s /q
)
if exist Binaries (
	echo Binaries
	rmdir Binaries /s /q
)
if exist binaries (
	echo binaries
	rmdir binaries /s /q
)

echo Plugins
if exist Plugins (
	for /R "Plugins" %%G in (\) do (
		if exist %%GIntermediate (
			echo %%GIntermediate
			rmdir %%GIntermediate /s /q
		)
		if exist %%Gintermediate (
			echo %%Gintermediate
			rmdir %%Gintermediate /s /q
		)
		if exist %%GBinaries (
			echo %%GBinaries
			rmdir %%GBinaries /s /q
		)
		if exist %%Gbinaries (
			echo %%Gbinaries
			rmdir %%Gbinaries /s /q
		)
	)
)
echo plugins
if exist plugins (
	for /R "plugins" %%G in (\) do (
		if exist %%GIntermediate (
			echo %%GIntermediate
			rmdir %%GIntermediate /s /q
		)
		if exist %%Gintermediate (
			echo %%Gintermediate
			rmdir %%Gintermediate /s /q
		)
		if exist %%GBinaries (
			echo %%GBinaries
			rmdir %%GBinaries /s /q
		)
		if exist %%Gbinaries (
			echo %%Gbinaries
			rmdir %%Gbinaries /s /q
		)
	)
)
if not exist source (
	if not exist Source (
		goto finish
	)
)
FOR %%F IN (*.uproject) DO (
 set projectFile=%%F
 goto eof
)
goto errorNoUprojectFound
:eof

echo %UATpath% "%CD%\%projectFile%"
call %UATpath% -projectfiles -project="%CD%\%projectFile%" -game -rocket -progress
goto finish

:errorNoUprojectFound
echo No uproject found

:finish