Created
February 19, 2015 14:51
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| require(pasillaBamSubset) | |
| require(GenomicAlignments) | |
| # BAM نقراء الملف | |
| bamFile <- untreated1_chr4() | |
| gReads <- readGAlignmentsFromBam(bamFile) | |
| #GAlignments object with 204355 alignments and 0 metadata columns: | |
| # seqnames strand cigar qwidth start end width njunc | |
| # <Rle> <Rle> <character> <integer> <integer> <integer> <integer> <integer> | |
| # [1] chr4 - 75M 75 892 966 75 0 | |
| # [2] chr4 - 75M 75 919 993 75 0 | |
| # [3] chr4 + 75M 75 924 998 75 0 | |
| # ... ... ... ... ... ... ... ... ... | |
| # [204353] chr4 + 75M 75 1348268 1348342 75 0 | |
| # [204354] chr4 - 75M 75 1348449 1348523 75 0 | |
| # [204355] chr4 - 75M 75 1350124 1350198 75 0 | |
| # ------- | |
| # seqinfo: 8 sequences from an unspecified genome | |
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