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August 10, 2020 18:06
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Test the performance of scipy vs the rotation functions in litebird_sim
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#!/usr/bin/env python3 | |
# -*- encoding: utf-8 -*- | |
import numpy as np | |
from litebird_sim import all_compute_pointing_and_polangle | |
from scipy.spatial.transform import Rotation as R | |
def polangle_scipy(theta, phi, poldir): | |
cos_psi = np.clip(-np.sin(phi) * poldir[:, 0] + np.cos(phi) * poldir[:, 1], -1, 1) | |
sin_psi = np.clip( | |
(-np.cos(theta) * np.cos(phi) * poldir[:, 0]) | |
+ (-np.cos(theta) * np.sin(phi) * poldir[:, 1]) | |
+ (np.sin(theta) * poldir[:, 2]), | |
-1, | |
1, | |
) | |
return np.arctan2(sin_psi, cos_psi) | |
def test_scipy(quat_matrix): | |
N = quat_matrix.shape[0] | |
result_matrix = np.empty((N, 3)) | |
r = R.from_quat(quat_matrix) | |
result = r.apply(np.repeat(np.array([0.0, 0.0, 1.0]).reshape(1, -1), N, axis=0)) | |
theta = np.arccos(result[:, 2]) | |
phi = np.arctan2(result[:, 1], result[:, 0]) | |
poldir = r.apply(np.repeat(np.array([1.0, 0.0, 0.0]).reshape(1, -1), N, axis=0)) | |
psi = polangle_scipy(theta, phi, poldir) | |
return np.array([theta, phi, psi]).transpose() | |
def test_lbs(quat_matrix): | |
result_matrix = np.empty((quat_matrix.shape[0], 3)) | |
all_compute_pointing_and_polangle(result_matrix, quat_matrix) | |
return result_matrix | |
quat_matrix = np.random.rand(10000, 4) | |
# Normalize the quaternions | |
quat_matrix /= np.sqrt(np.sum(quat_matrix * quat_matrix, axis=1))[:, None] | |
print( | |
"Consistency check:", np.allclose(test_scipy(quat_matrix), test_lbs(quat_matrix),), | |
) | |
# poetry run ipython | |
# In [1]: %run scipy_rotations_test.py | |
# Consistency test: True | |
# | |
# In [2]: %timeit test_lbs(quat_matrix) | |
# 1.55 ms ± 12.2 µs per loop (mean ± std. dev. of 7 runs, 1000 loops each) | |
# | |
# In [3]: %timeit test_scipy(quat_matrix) | |
# 3.48 ms ± 18.8 µs per loop (mean ± std. dev. of 7 runs, 100 loops each) |
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