To start, read the official release notes.
If your install fits into "vanilla Debian plus maybe a handful of 3rd-party repos", then this guide for a simple upgrade to Debian 13 "trixie" from Debian 12 "bookworm" can be helpful. 3rd-party repos are handled with a find command.
If you are on a fork of Debian such as RasPI OS, use their instructions, not this gist.
Note upgrade is only supported from Debian 12 to Debian 13. If you are on Debian 11, upgrade to Debian 12 first. Then once on Debian 12, you can upgrade to Debian 13.
From Debian 13, you can upgrade to Debian 14 after its release in summer 2027.
This guide is only for the OS itself. Applications are as plentiful as sand on the beach, and they may all require additional steps. Plan for that.
- Check free disk space
df -h
5 GiB free is a conservative amount. sudo apt clean and sudo apt autoremove can be used to free some disk space.
On a server with only docker installed, even 1 GiB free was sufficient. Do err on the side of caution here, however.
- Identify any 3rd-party repos that may need to be updated. They'll be changed with a
findcommand, below.
ls /etc/apt/sources.list.d
- Update current distribution
sudo apt update && sudo apt full-upgrade
If this brought in a new kernel, sudo reboot - otherwise continue
- Optional: Start a screen session
So that an SSH disconnect doesn't stop your upgrade halfway through, you can run in screen:
sudo apt install -y screen && screen
- Change old-style Debian repos to trixie, from bookworm.
sources.listmight no longer be in use. If your system usesdebian.sources, the next step takes care of that
sudo sed -i 's/bookworm/trixie/g' /etc/apt/sources.list
non-freehas been split since Debian 12 and if used, you should also usenon-free-firmware. If you are unsure, check and adjust. More complete instructions are in the Debian 12 release notes and the gist for Debian 12 upgrade
- Change all repos in sources.list.d to trixie, from bookworm
This assumes the repos have trixie versions. Run
sudo apt updateafter the change to trixie to confirm, and deal with any repos that aren't available in trixie.
sudo find /etc/apt/sources.list.d -type f \( -name '*.list' -o -name '*.sources' \) -exec sed -i 's/bookworm/trixie/g' {} \;
Run sudo apt update and if it fails on some repos because they don't have trixie versions, disable them for now, then test again.
- Update Debian
For the following, say Yes to restarting services, and keep existing config files when prompted.
sudo apt update && sudo apt full-upgrade
- If you use mdadm, stop and check EFI
Having more than one ESP (EFI System Partition) is an unusual setup. If you are certain you have only one ESP, move on to the next step.
If you have multiple ESPs for this copy of Debian, make sure they are all upgraded. Debian 13 uses grub 2.12.
- Reboot - If you use mdadm, only proceed if you know EFI is OK
sudo reboot
- Clean up old repos
sudo apt autoremove && sudo apt clean
- Modernize Debian sources
Optional but recommended: Switch to deb822 format for the sources.list. This will write /etc/apt/sources.list.d/debian.sources and /etc/apt/sources.list.d/debian-backports.sources
sudo apt modernize-sources
Caveat that trixie-backports might not have a
Signed-Byon some 3rd-party mirrors. You can fix this by manually settingSigned-By: /usr/share/keyrings/debian-archive-keyring.gpgin/etc/apt/sources.list.d/debian-backports.sources
- Clean up old
/tmp
Optional: Remove files from the old /tmp directory. Debian 13 replaced it with a tmpfs, see https://www.debian.org/releases/trixie/release-notes/issues.en.html#the-temporary-files-directory-tmp-is-now-stored-in-a-tmpfs
On most systems /tmp will be empty or all-but. If you did store large files here, it can be worth the effort to clean up.
sudo mkdir /mnt/tmp-chk
sudo mount --bind / /mnt/tmp-chk
ls -lha /mnt/tmp-chk/tmp/
Remove files from /mnt/tmp-chk/tmp as you see fit, then unmount again
sudo umount /mnt/tmp-chk
sudo rm -rf /mnt/tmp-chk
Caution: This Ansible playbook does not check EFI has been updated on all disks, on an mdadm setup with multiple ESPs. Only use on machines with only one ESP, or adjust this playbook to take care of upgrading all EFI partitions.
Config ansible.cfg:
[defaults]
interpreter_python = /usr/bin/python3
Playbook trixie.yml:
---
- name: Upgrade to Debian trixie
hosts: all
serial: 1
gather_facts: false
roles:
- base/upgrade_trixie
Role base/upgrade_trixie/tasks/main.yml:
---
- name: Get distribution version
setup:
filter: ansible_distribution*
- name: Skip if not Debian 12
meta: end_host
when: ansible_distribution != 'Debian' or ansible_distribution_major_version != '12'
- name: apt clean
apt:
clean: yes
become: yes
- name: Get filesystem facts
setup:
filter: ansible_mounts
- name: Fail if free space on / is below 5 GiB
ansible.builtin.assert:
that:
- item.size_available > (5 * 1024 * 1024 * 1024)
fail_msg: "Free disk space on {{ item.mount }} is below 5 GiB"
loop: "{{ ansible_mounts }}"
when: item.mount == "/"
- name: All apt packages up to date
apt:
upgrade: dist
update_cache: yes
become: yes
- name: apt autoremove
apt:
autoremove: yes
become: yes
- name: apt clean
apt:
clean: yes
become: yes
- name: Check if reboot required
ansible.builtin.stat:
path: /run/reboot-required
get_checksum: no
register: reboot_required_file
- name: Reboot if required
ansible.builtin.reboot:
msg: "Reboot initiated by Ansible"
connect_timeout: 5
reboot_timeout: 600
pre_reboot_delay: 0
post_reboot_delay: 60
test_command: whoami
when: reboot_required_file.stat.exists
become: true
- name: Switch OS from bookworm to trixie
ansible.builtin.replace:
path: /etc/apt/sources.list
regexp: 'bookworm'
replace: 'trixie'
become: yes
- name: Find all 3rd-party repos
ansible.builtin.find:
paths: /etc/apt/sources.list.d
patterns: '*'
recurse: no
register: third_party_repos
- name: Switch 3rd-party repos from bookworm to trixie
ansible.builtin.replace:
path: "{{ item.path }}"
regexp: 'bookworm'
replace: 'trixie'
loop: "{{ third_party_repos.files }}"
loop_control:
label: "{{ item.path }}"
become: yes
- name: Use apt to move to trixie
apt:
upgrade: dist
update_cache: yes
become: yes
- name: Get distribution version
setup:
filter: ansible_distribution*
- name: Fail if not Debian 13
assert:
that:
- ansible_distribution_major_version == '13'
fail_msg: "Upgrade to Debian 13 failed"
- name: apt autoremove
apt:
autoremove: yes
become: yes
- name: apt clean
apt:
clean: yes
become: yes
- name: Reboot on trixie
ansible.builtin.reboot:
msg: "Reboot initiated by Ansible"
connect_timeout: 5
reboot_timeout: 600
pre_reboot_delay: 0
post_reboot_delay: 60
test_command: whoami
become: yes
- name: Modernize apt sources
ansible.builtin.command:
cmd: apt -y modernize-sources
become: yes
- name: Pause for 5 minutes for staggered upgrades
pause:
minutes: 5
Pls help!!!!
Do I need to just re install os???

I do have /home and /etc backed up
Also, why did you add auto remove into the update command, why didn't you put it after (maybe after rebooting)???